#!/usr/bin/perl use strict; use warnings; my $file = 'eingabedatei.fasta'; { local $/ = "\n>"; open(my $fh,"<",$file) or die $!; while(my $entry = <$fh>){ chomp $entry; next if($entry =~ /^\s*$/); my ($header,$seq) = split(/\n/,$entry,2); $seq =~ s/[\n\s]//gs; print "header: $header\n"; $seq =~ s/([A-Z]{70})/$1\n/gs; print "Sequenz: $seq\n"; } close $fh; }